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rhizobase

Table of Contents

List of 19 species / genome projects

CSV TXT ? | +/- | Top

Species (Data Source Name)	Lineage	Release
Mesorhizobium loti MAFF303099		Proteobacteria; Alphaproteobacteria; Rhizobiales;Phyllobacteriaceae; Mesorhizobium
Bradyrhizobium japonicum USDA110		Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
Sinorhizobium meliloti 1021		Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Sinorhizobium/Ensifer group; Sinorhizobium
Rhizobium etli CFN42		Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Rhizobium leguminosarum bv. viciae 3841		Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Rhizobium sp. pNGR234ab
M.loti R7A symbiosis island
Bradyrhizobium sp. BTAi1		Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
Bradyrhizobium sp. ORS278		Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
Azorhizobium caulinodans ORS571		Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Azorhizobium
Frankia alni ACN14a		Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia
Frankia sp. CcI3		Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia
Frankia sp. EAN1pec		Actinobacteria; Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia
Azoarcus sp. BH72		Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus
Gluconacetobacter diazotrophicus PAl 5		Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Gluconacetobacter
Klebsiella pneumoniae Kp342
Rhizobium sp. NGR234		Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium
Azospirillum sp. B510		Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum
Cupriavidus taiwanensis LMG 19424		Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus

Resources

Analysis and Tools

BLAST2	Similarity search for genes Similarity search for genomes
KazusaMart	MartView

KazusaAPI

Species (Genome Projects)

/rhizobase.csv -- CSV format. CSV
/rhizobase.txt -- tab-delimitered TXT format. TXT

File format:

	Column	Description and example
1	Data Source Name	c.f. Synechocytis
2	Full name	c.f. Synechocystis sp. PCC 6803
3	NCBI Taxonomy ID	c.f. 1148
4	NCBI Taxonomy lineage	c.f. Bacteria; Cyanobacteria; Chroococcales; Synechocystis
5	Release note	Kazusa (2001)

RhizoBase

Kazusa DNA Research Institute

Licence and disclaimer

Kazusa DNA Research Institute released the web site and the data under the CC0 public domain license.
The information at this web site is provided by Kazusa DNA Research Institute (KDRI). While KDRI endeavors to keep the information up to date and correct, it dose not warrant or assume any legal liability or responsibility for the accuracy, completeness, or usefulness of any information, apparatus, product, or process disclosed.