## The genome assemblies were searched against Arabidopsis rRNA (cDNA) sequences with blast. ## The blast hits with < 85% coverage and < 80% identity for target ncRNA have been filtered out. scaffold937 144561 144663 Mt-5S-rRNA 1 87.2% 96.12% scaffold4193 11133 11292 5.8S-rRNA 1(2) 98.1% 95.03% scaffold4193 14280 14439 5.8S-rRNA 2(2) 98.1% 95.03% scaffold47 341612 341716 Mt-5S-rRNA 1 88.9% 95.24% scaffold3597 3651 3763 Mt-5S-rRNA 1 95.7% 99.12% scaffold1248 59951 60061 Mt-5S-rRNA 1 94% 99.10% scaffold6809 11458 13165 18S-rRNA 1 91.4% 86.08% scaffold341 57166 57325 5.8S-rRNA 1 98.1% 93.17% scaffold341 55113 56938 18S-rRNA 1 96.6% 93.42% scaffold1118 58691 58793 4.5S-rRNA 1 100% 99.03% scaffold1118 59050 59170 Chl-5S-rRNA 1 100% 97.52% scaffold2697 6718 6877 5.8S-rRNA 1 98.1% 92.55% scaffold2697 7105 8931 18S-rRNA 1 96.5% 94.67%