Scientific name Accession name Assembly version Publication PR
icon Actinidia arguta Ubaishi-male AAR_r2.2 Akagi et al. (2023) PR
icon Actinidia polygama Hokkaido-male APO_r1.1 Akagi et al. (2023) PR
icon Actinidia rufa Nakamura-B-male ARU_r1.0 Akagi et al. (2023) PR
icon Anabaena sp. PCC 7120 ASM970v1 Kaneko et al. (2001) PR
icon Ananas comosus Yugafu ACO_r3.3C.pmol Nashima et al. (2022) PR
icon Ananas comosus Yugafu ACO_r3.3H Nashima et al. (2022) PR
icon Arabidopsis thaliana Col-1 TAIR10 The Arabidopsis Genome Initiative (2000) PR
icon Arachis duranensis V14167 V14167.gnm1.SWBf Bertioli et al. (2016) PR
icon Arachis hypogaea Tifrunner Tifrunner.gnm2.J5K5 Bertioli et al. (2019) PR
icon Arachis ipaensis K30076 K30076.gnm1.bXJ8 Bertioli et al. (2016) PR
icon Asparagus kiusianus K1 AKIK1p1_r1.0 Shirasawa et al. (2022) PR
icon Asparagus kiusianus K1 AKIK1p2_r1.0 Shirasawa et al. (2022) PR
icon Asparagus kiusianus K2 AKIK2p1_r1.0 Shirasawa et al. (2022) PR
icon Asparagus kiusianus K2 AKIK2p2_r1.0 Shirasawa et al. (2022) PR
icon Bradyrhizobium japonicum USDA110 ASM1136v1 Kaneko et al. (2002) PR
icon Brassica rapa Chiifu-401-42 v3.0 Wang et al. (2011) PR
icon Capsicum annuum Takanotsume CAN_r1.2.pmol Shirasawa et al. (2023) PR
icon Castanea crenata Ginyose CCR_r1.0 Shirasawa et al. (2021) PR
icon Cerasus x kanzakura Atami-zakura ATM_r1.0.pmol Shirasawa et al. (2021) PR
icon Cerasus x kanzakura Kawazu-zakura KWZ_r1.0.pmol Shirasawa et al. (2021) PR
icon Cerasus x yedoensis #136 CYE_r3.1.pmol Shirasawa et al. (2019) PR
icon Chamaecyparis obtusa GFB00119 COB_r1.0 Shirasawa et al. (2022) PR
icon Chenopodium quinoa J075 J075 Kobayashi et al. (2024) PR
icon Chenopodium quinoa J100 J100 Kobayashi et al. (2024) PR
icon Chenopodium quinoa J131 J131
icon Chenopodium quinoa Kd Cqu_r1.0 Yasui et al. (2016) PR
icon Chrysanthemum seticuspe Gojo-0 Gojo-0 v1 Nakano et al. (2021) PR
icon Chrysanthemum seticuspe XMRS10 CSE_r1.0 Hirakawa et al. (2019) PR
icon Citrus kinokuni Kishu mandarin CKIhap1_r1.0 Isobe et al. (2023)
icon Citrus kinokuni Kishu mandarin CKIhap2_r1.0 Isobe et al. (2023)
icon Citrus kinokuni Kishu mandarin CKIuph_r1.0 Isobe et al. (2023)
icon Citrus nobilis Kunenbo mandarin CKUhap1_r1.0 Isobe et al. (2023)
icon Citrus nobilis Kunenbo mandarin CKUhap2_r1.0 Isobe et al. (2023)
icon Citrus nobilis Kunenbo mandarin CKUuph_r1.0 Isobe et al. (2023)
icon Citrus unshiu Miyagawa wase CUNphKi_r1.0 Isobe et al. (2023)
icon Citrus unshiu Miyagawa wase CUNphKu_r1.0 Isobe et al. (2023)
icon Citrus unshiu Miyagawa wase CUNuph_r1.0 Isobe et al. (2023)
icon Cryptomeria japonica GFA01029 CJA_r1.0 Shirasawa et al. (2022) PR
icon Cunninghamia lanceolata GFHN00090 CLA_r1.0 Shirasawa et al. (2022) PR
icon Dianthus caryophyllus Francesco DCA_r1.0 Yagi et al. (2014) PR
icon Diospyros kaki Taishu DKA_r1.0 Horiuchi et al. (2023) PR
icon Diospyros lotus Kunsenshi-male DLO_r1.0_pseudomolecules Akagi et al. (2020) PR
icon Echinochloa phyllopogon R511 EPH_r1.1 Sato MP et al. (2023) PR
icon Eschscholzia californica Hitoezaki ECA_r1.0 Yamada et al. (2021)
icon Eucalyptus camaldulensis CPT1 EUC_r1.0 Hirakawa et al. (2011) PR
icon Eustoma grandiflorum 10B-620 Egra_v1.0 Shirasawa et al. (2023) PR
icon Fagopyrum esculentum BC1F6 FES_r1.0 Yasui et al. (2016) PR
icon Fagopyrum esculentum GS1 FesGS1_phased_r1.0 Fawcett et al. (2023) PR
icon Fagopyrum esculentum PL4 FesPL4_r1.1_pseudomolecule_contigs Fawcett et al. (2023) PR
icon Fagopyrum homotropicum C9255 Fho_r1.0_Chr1-8_utg Fawcett et al. (2023) PR
icon Felis catus Senzu AnAms1.0 Matsumoto et al. (2024) PR
icon Ficus carica Caprifig 6085 FCA6085_r1.1 Ikegami et al. (2024) PR
icon Ficus carica Horaishi FCA_r2.3 Ikegami et al. (2024) PR
icon Ficus carica Horaishi Horaishi_ver.1 Mori et al. (2017) PR
icon Ficus erecta FE-Hiroshima-1 FER_r1.1 Shirasawa et al. (2020) PR
icon Fragaria iinumae iinumae1 FII_r1.1 Hirakawa et al. (2014) PR
icon Fragaria nipponica nipponica1 FNI_r1.1 Hirakawa et al. (2014) PR
icon Fragaria nubicola CFRA522 FNU_r1.1 Hirakawa et al. (2014) PR
icon Fragaria orientalis FRA536 FOR_r1.1 Hirakawa et al. (2014) PR
icon Fragaria x ananassa Reikou FANhybrid_r1.2 Hirakawa et al. (2014) PR
icon Fragaria x ananassa Reikou FAN_r2.3 Shirasawa et al. (2021)
icon Gerbera hybrida Opal Ghyb_p1.1
icon Gloeobacter violaceus PCC 7421 ASM1138v1 Nakamura et al. (2003) PR
icon Glycine soja W05 ASM419377v2 Xie et al. (2019) PR
icon Glycyrrhiza uralensis 308-19 Glur_r1.0 Rai et al. (2022) PR
icon Hordeum vulgare 10TJ18 BPGv2-10TJ18 Jayakodi et al. (2024) PR
icon Hordeum vulgare Aizu6 BPGv2-Aizu6 Jayakodi et al. (2024) PR
icon Hordeum vulgare Golden Melon BPGv2-GoldenMelon Jayakodi et al. (2024) PR
icon Humulus japonicus Seta-line hic_chr_v1.1 Akagi et al. (2025) PR
icon Humulus lupulus 10-12 haploid_v3.0 Akagi et al. (2025) PR
icon Humulus lupulus Saaz haploid_v3.0 Akagi et al. (2025) PR
icon Hydrangea macrophylla Aogashima-1 HMA_r1.2_0 Nashima et al. (2021) PR
icon Hydrangea macrophylla Aogashima-1 HMA_r1.2_1 Nashima et al. (2021) PR
icon Ipomoea batatas Xushu18 IBA_r1.0 Yoon et al. (2022)
icon Ipomoea trifida 0431-1 ITRk_r1.0 Hirakawa et al. (2015) PR
icon Ipomoea trifida Mx23Hm ITR_r1.0 Hirakawa et al. (2015) PR
icon Ipomoea trifida Mx23Hm ITR_r2.2 Yoon et al. (2022)
icon Jatropha curcas N/A JAT_r3.0 Sato S et al. (2011) PR
icon Jatropha curcas N/A JAT_r4.5 Hirakawa et al. (2012)
icon Klebsormidium flaccidum NIES-2285 ASM70883v1 Hori et al. (2014) PR
icon Larix kaempferi GFE32203 LKA_r1.0 Shirasawa et al. (2022) PR
icon Lentinula edodes XR1 xr1.hap1 Yoshitake et al. (2025) PR
icon Lentinula edodes XR1 xr1.hap2 Yoshitake et al. (2025) PR
icon Lotus japonicus MG-20 Lj2.5 Sato S et al. (2008) PR
icon Lyophyllum shimeji AT787 LshimejAT787 Kobayashi et al. (2023) PR
icon Macrotyloma uniflorum HPK-4 MUN_r1.11 Shirasawa et al. (2021) PR
icon Malcolmia littorea MAL-LIT-1 [Sp-54] MLI_r1.0 Shirasawa et al. (2025)
icon Malpighia emarginata NRA309 NRA309_r1.0.pmol Shirasawa et al. (2024) PR
icon Meloidogyne incognita Kmmt_Gs004 MINJ2 Asamizu et al. (2020) PR
icon Mesorhizobium japonicum MAFF 303099 ASM962v1 Kaneko et al. (2000) PR
icon Microcystis aeruginosa NIES-843 ASM1062v1 Kaneko et al. (2007) PR
icon Nicotiana benthamiana lab strain Nbe.v1 Kurotani et al. (2023) PR
icon Nicotiana benthamiana lab strain Nbe.v1.1 Kurotani et al. (2024) PR
icon Ophiorrhiza pumila Benth Opu_r1.4 Rai et al. (2021) PR
icon Oryza sativa Kitaake KIT_r1.0.pmol Fujino et al., unpublished
icon Oryza sativa New Udai21 UD21_r1.0 Ikeda et al. (2025) Up PR
icon Perilla frutescens SekihoS8 Pfru_SekihoUp_1.0 Kinoshita et al. (2025) PR
icon Pisum sativum JI128 PSA_r1.0 Shirasawa et al. (2021) PR
icon Prunus avium Satonishiki PAV_r1.0 Shirasawa et al. (2017) PR
icon Pyrus pyrifolia Nijisseiki PPY_r1.0 Shirasawa et al. (2021) PR
icon Raphanus sativus Aokubi S-h RSA_r1.0 Kitashiba et al. (2014) PR
icon Raphanus sativus Okute-Sakurajima RSAskr_r1.0 Shirasawa et al. (2020) PR
icon Rhododendron kiyosumense KMT1 RKI_r1.0 Shirasawa et al. (2021) PR
icon Rhododendron ripense Hi-Oni1 RRI_r1.1.pmol Shirasawa et al. (2021) PR
icon Rosa multiflora N/A RMU_r2.0 Nakamura et al. (2018) PR
icon Saintpaulia ionantha Kilauea SIO_r2.0 Kurata et al. (2024)
icon Silene dioica SdJapan_07M Sdio1.0 Akagi et al. (2025)
icon Silene latifolia SLGerPM1 Slat1.0 Akagi et al. (2025)
icon Silene vulgaris SvPH1 Svul1.0 Akagi et al. (2025)
icon Solanum cheesmaniae LA0166 SCH_r1.0.pmol Iki et al. (2025) PR
icon Solanum lycopersicum Heinz 1706 SL4.0 The Tomato Genome Consortium (2012) PR
icon Solanum lycopersicum LA1673 SLYcer_r1.1 Takei et al. (2021) PR
icon Solanum lycopersicum Micro-Tom SLM_r1.2 Nagasaki et al. (2024) PR
icon Solanum lycopersicum Micro-Tom SLM_r2.0.pmol Shirasawa & Ariizumi (2024) PR
icon Solanum melongena Nakate-Shinkuro SME_r2.5.1 Hirakawa et al. (2014) PR
icon Solanum pimpinellifolium LA1670 SPI_r1.1 Takei et al. (2021) PR
icon Spinacia oleracea 03-009 SOL_r1.1 Hirakawa et al. (2021) PR
icon Synechocystis sp. PCC 6803 ASM972v1 Kaneko et al. (1996) PR
icon Thermosynechococcus elongatus BP-1 ASM1134v1 Nakamura et al. (2002) PR
icon Tricholoma matsutake Matsutake TMA_r1.1 Kurokochi et al. (2023) PR
icon Trifolium alexandrinum Fahl TalF_r1.0 Sato MP et al. (2024) PR
icon Trifolium alexandrinum Helaly TalH_r1.0 Sato MP et al. (2024) PR
icon Trifolium subterraneum Daliak TSUd_r1.1 Hirakawa et al. (2016) PR
icon Trifolium subterraneum Daliak TSUd_r3.0 Shirasawa et al. (2023) PR
icon Triticum aestivum Fielder wheat_cv_fielder_v1_assembly Sato K et al. (2021)
icon Turritopsis dohrnii TD-1 TUR_r2.0.1 Hasegawa et al. (2023) PR
icon Veronica peregrina Sakai03 VPE_r1.0p Hirano et al. (2025) PR
icon Vicia sativa KSR5 VSA_r1.0 Shirasawa et al. (2021) PR
icon Vitis labruscana x Vitis vinifera Shine Muscat VSMuph_r2.0 Shirasawa et al. (2022) PR
icon Zoysia japonica Nagirizaki ZJN_r1.1 Tanaka et al. (2016) PR
icon Zoysia matrella Wakaba ZMW_r1.0 Tanaka et al. (2016) PR
icon Zoysia pacifica Zanpa ZPZ_r1.0 Tanaka et al. (2016) PR
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